miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|114494211|gb|EE806544.1|EE806544 TTCCCGGGATACCCAGGCAGGGCGGGGCGGCACCTCGGCTCCCGCGGCGAGGACACCCCGGGAGCAAGGCGCCACGCGTC
TGGGCGCCTCTCCTTCCGGTGAGGGGCTCTGGGTCTGTGGGGCGGGGCCTCATGGAGGCCAGTGGCCCCGGGACCTGCGG
AGGAGGGGCTGAGACCCGGGGCTCGGAGGGGCGGCTGGCACCTGAGTCGAGGGTACACTTCCGAGTGACAAGGTTCATCA
TGGAGGCAGGTATCAAGCTAGGGATGCGGTCCATCCCCATCGCCACCGCCTGTACCATTTACCATAAATTCTTCTGCGAG
ATCAACCTGGACGCCTACGACCCCTACTTGGTGGCCATGTCTTCCCTTTACTTGGCCGGCAAAGTGGAGGAACAGCATCT
GCGCACACGTGACATCATCAATGTTTCCAACAGGTACTTCCACCCGGGCAGTGACCCCTTGGAGCTAGACTCGCGCTTCT
GGGAGATCCGGGACAGCATCGTACAGTGCGAACTGCTCGTGCTGCGGGTCCTGCGTTTTCAGGTCTCCTTCCAGCACCCG
CACAAGTACCTGCTCCACTACCTGGTCTCGCTCAAGAACTGGCTGAACCGTTACAGCTGGCAGCGGACCCCTGTCTCCGT
TACTGCCTGGGCTTTGCTACAGGACAGCTACCACGGGGGGCTTTGCCTCCGCTTCCGGGCTCAGCACATAGCCGTGGCAG
TAATCCACCTGGCCCTACAGCCT




Most similar to sp|Q8QZR8|FA58A_MOUSE

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q8QZR8|FA58A_MOUSE Cyclin-related protein FAM58A OS=Mus musculus
           GN=Fam58a PE=2 SV=2
          Length = 250

 Score =  362 bits (928), Expect = 2e-99
 Identities = 172/203 (84%), Positives = 190/203 (93%)
 Frame = +3

Query: 132 MEASGPGTCGGGAETRGSEGRLAPESRVHFRVTRFIMEAGIKLGMRSIPIATACTIYHKF 311
           MEA  P +C  G     +E R APE+RVHFRVTRFIMEAG+KLGM+SIPIATACTIYHKF
Sbjct: 1   MEAVRPDSCESGPAAPRAEERPAPEARVHFRVTRFIMEAGVKLGMQSIPIATACTIYHKF 60

Query: 312 FCEINLDAYDPYLVAMSSLYLAGKVEEQHLRTRDIINVSNRYFHPGSDPLELDSRFWEIR 491
           FCEINLDAYD YLVAMSS+YLAGKVEEQHLRTRDIINVS+RYF+PGS+PLELDSRFWE+R
Sbjct: 61  FCEINLDAYDLYLVAMSSIYLAGKVEEQHLRTRDIINVSHRYFNPGSEPLELDSRFWELR 120

Query: 492 DSIVQCELLVLRVLRFQVSFQHPHKYLLHYLVSLKNWLNRYSWQRTPVSVTAWALLQDSY 671
           DSIVQCELL+LRVLRFQVSFQHPHKYLLHYL+SLKNWLNRYSWQRTP+SVTAWALL+DSY
Sbjct: 121 DSIVQCELLMLRVLRFQVSFQHPHKYLLHYLISLKNWLNRYSWQRTPISVTAWALLRDSY 180

Query: 672 HGGLCLRFRAQHIAVAVIHLALQ 740
           HGGLCLRF+AQH+AVAV++LALQ
Sbjct: 181 HGGLCLRFQAQHLAVAVLYLALQ 203